What I'm about to say should apply to everybody who offers anisotropic filtering, not just one company.
When the user chooses Application controlled anisotropic filtering or forces anisotropic in a control panel without optimizations, then ALL STAGES not just the first stage or the first couple of stages should be based on proper trilinear filtering.
If this does not occur, then you are not doing anisotropic filtering. Its that simple. You can argue all you like that AF is not precisely defined, but all chips offering it prior to R200 always used trilinear filtering for all stages.
Do whatever you want with optimized modes, but in quality and application controlled modes do it properly.